STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0203PFAM: protein of unknown function DUF956. (115 aa)    
Predicted Functional Partners:
Apre_0200
protein-N(pi)-phosphohistidine--sugar phosphotransferase; PFAM: PTS system sorbose subfamily IIB component; PTS system fructose subfamily IIA component; KEGG: sec:SC1824 sugar specific PTS family mannose- specific enzyme IIAB.
 
  
 0.975
Apre_0202
PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: spe:Spro_2815 mannose-specific PTS system protein IID.
 
  
 0.962
Apre_0201
PFAM: phosphotransferase system PTS sorbose- specific IIC subunit; KEGG: stm:STM1831 mannose-specific enzyme IIC.
 
  
 0.959
Apre_0199
PFAM: oxidoreductase domain protein; Semialdehyde dehydrogenase NAD - binding; KEGG: msu:MS1414 MviM protein.
 
     0.600
Apre_1665
PFAM: PTS system fructose subfamily IIA component; KEGG: vvy:VVA1511 phosphotransferase system, mannose/fructose-specific component IIA.
 
  
 0.564
Apre_0141
KEGG: bcy:Bcer98_1171 mannose-6-phosphate isomerase, class I; TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I.
 
     0.553
Apre_0198
Hypothetical protein.
       0.526
Apre_1675
protein-N(pi)-phosphohistidine--sugar phosphotransferase; PFAM: PTS system sorbose subfamily IIB component; KEGG: ppr:PBPRB1038 N-acetylgalactosamine-specific PTS system transporter subunit IIB.
 
  
 0.494
Apre_0157
PFAM: PTS system sorbose subfamily IIB component; KEGG: plu:plu0835 PTS system, N-acetylgalactosamine- specific IIB component 2 (EIIB-AGA') (N- acetylgalactosamine-permease IIB component 2) (phosphotransferase enzyme II, B component 2).
 
  
 0.476
Apre_0204
TIGRFAM: small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; elongation factor G domain IV; KEGG: translation elongation factor G; K02355 elongation factor EF-G.
       0.469
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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