Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0206PFAM: lipolytic protein G-D-S-L family; KEGG: swd:Swoo_3734 GDSL family lipase. (173 aa)    
Predicted Functional Partners:
Apre_0207
PFAM: MscS Mechanosensitive ion channel; KEGG: rlt:Rleg2_3228 MscS mechanosensitive ion channel.
     
 0.801
Apre_0205
KEGG: dal:Dalk_0889 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase all-beta; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
  
    0.786
Apre_0208
PFAM: protein of unknown function DUF951; KEGG: ban:BA5725 hypothetical protein.
       0.781
Apre_0204
TIGRFAM: small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; elongation factor G domain IV; KEGG: translation elongation factor G; K02355 elongation factor EF-G.
       0.687
Apre_0408
KEGG: bca:BCE_3356 hypothetical protein.
  
     0.433
Apre_0202
PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: spe:Spro_2815 mannose-specific PTS system protein IID.
       0.419
Apre_0203
PFAM: protein of unknown function DUF956.
       0.419
Apre_0200
protein-N(pi)-phosphohistidine--sugar phosphotransferase; PFAM: PTS system sorbose subfamily IIB component; PTS system fructose subfamily IIA component; KEGG: sec:SC1824 sugar specific PTS family mannose- specific enzyme IIAB.
     
 0.414
Apre_0455
Putative transcriptional regulator, RpiR family; KEGG: bsu:BSU08190 hypothetical protein.
  
    0.413
Apre_0201
PFAM: phosphotransferase system PTS sorbose- specific IIC subunit; KEGG: stm:STM1831 mannose-specific enzyme IIC.
       0.407
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.