STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0215PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcz:BCZK1718 multidrug ABC transporter, ATP- binding protein. (530 aa)    
Predicted Functional Partners:
Apre_0687
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bra:BRADO0891 peptide ABC transporter ATP- binding protein.
 
     0.613
Apre_0168
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH0290 ABC transporter ATP-binding protein.
  
     0.588
Apre_0431
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcb:BCB4264_A4187 ABC transporter, ATP- binding protein.
  
     0.542
Apre_0213
PFAM: putative rRNA methylase; KEGG: nma:NMA0960 hypothetical protein NMA0960.
       0.505
Apre_0214
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: conserved hypothetical protein.
       0.505
Apre_0324
Hypothetical protein; KEGG: AGAP002737-PA.
  
     0.487
Apre_0261
PFAM: GCN5-related N-acetyltransferase; KEGG: sbn:Sbal195_1671 GCN5-related N- acetyltransferase.
  
     0.484
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.483
Apre_0226
Putative membrane protein.
  
     0.476
Apre_0091
Hypothetical protein; KEGG: bcr:BCAH187_C0151 S-layer domain ribonuclease.
  
     0.468
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.