STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0240PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr7002 ABC transporter, permease protein. (277 aa)    
Predicted Functional Partners:
Apre_0238
PFAM: extracellular solute-binding protein family 1; KEGG: bsu:BSU32600 hypothetical protein.
 
 0.996
Apre_0239
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_4548 binding-protein-dependent transport systems inner membrane component.
 
 0.995
Apre_0242
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bcb:BCB4264_A4122 sugar ABC transporter, ATP- binding protein; Belongs to the ABC transporter superfamily.
 
 0.984
Apre_1671
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bcb:BCB4264_A4122 sugar ABC transporter, ATP- binding protein; Belongs to the ABC transporter superfamily.
 
 0.959
Apre_0142
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bha:BH1140 sugar ABC transportor ATP-binding protein.
 
 0.955
Apre_0064
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH1140 sugar ABC transportor ATP-binding protein.
 
 0.951
Apre_0133
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ses:SARI_01293 hypothetical protein.
 
 0.944
Apre_0252
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mlo:mlr7224 sugar ABC transportor, ATP- binding protein.
 
 0.926
Apre_0253
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcz:BCZK1635 sugar ABC transporter, permease.
 
 0.883
Apre_1667
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcr:BCAH187_A2103 ABC transporter, permease protein.
 
 
 0.872
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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