STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0246KEGG: ecq:ECED1_2381 hypothetical protein, putative glycosyltransferase. (259 aa)    
Predicted Functional Partners:
Apre_0245
PFAM: glycosyl transferase family 2; KEGG: gme:Gmet_2008 glycosyl transferase family protein.
 
     0.809
Apre_0249
PFAM: SH3 type 3 domain protein; protein of unknown function DUF1058; SMART: SH3 domain protein; KEGG: bcy:Bcer98_1493 NLP/P60 protein.
     
 0.802
Apre_0248
ATPase involved in chromosome partitioning-like protein; KEGG: rce:RC1_4006 succinoglycan biosynthesis transport protein ExoP.
     
 0.801
Apre_0247
PFAM: lipopolysaccharide biosynthesis protein; KEGG: GJ16854 gene product from transcript GJ16854- RA.
       0.782
Apre_0524
PFAM: metallophosphoesterase.
 
   
 0.730
Apre_0324
Hypothetical protein; KEGG: AGAP002737-PA.
  
     0.728
Apre_0314
Hypothetical protein.
  
     0.696
Apre_0408
KEGG: bca:BCE_3356 hypothetical protein.
 
     0.676
Apre_0897
KEGG: hypothetical protein.
  
     0.669
Apre_0965
KEGG: hypothetical protein.
  
    0.646
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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