Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Apre_0251PFAM: transposase IS116/IS110/IS902 family protein; KEGG: Transposase IS116/IS110/IS902 family protein. (407 aa)    
Predicted Functional Partners:
Apre_0250
Hypothetical protein.
       0.428
Apre_0252
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mlo:mlr7224 sugar ABC transportor, ATP- binding protein.
       0.407
Apre_0253
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcz:BCZK1635 sugar ABC transporter, permease.
       0.407
Apre_0254
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: smd:Smed_2313 binding-protein-dependent transport systems inner membrane component.
       0.407
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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