Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
Apre_0303PFAM: NLP/P60 protein; SH3 type 3 domain protein; KEGG: gbm:Gbem_1003 NLP/P60 protein. (357 aa)    
Predicted Functional Partners:
Apre_0304
Response regulator receiver protein; KEGG: asu:Asuc_2102 hypothetical protein.
       0.580
Apre_0295
PFAM: basic membrane lipoprotein; KEGG: bcb:BCB4264_A3890 nucleoside-binding protein.
   
    0.458
glsA
PFAM: Glutaminase, core; KEGG: Glutaminase family protein; K01425 glutaminase; Belongs to the glutaminase family.
       0.427
Apre_0667
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; PASTA domain containing protein; KEGG: bsu:BSU15770 protein kinase.
 
   
 0.415
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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