STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0306PFAM: major facilitator superfamily MFS_1; KEGG: cjj:CJJ81176_1679 major facilitator superfamily protein. (384 aa)    
Predicted Functional Partners:
Apre_0324
Hypothetical protein; KEGG: AGAP002737-PA.
  
     0.637
Apre_0897
KEGG: hypothetical protein.
  
     0.633
Apre_1016
Hypothetical protein.
  
     0.605
Apre_0091
Hypothetical protein; KEGG: bcr:BCAH187_C0151 S-layer domain ribonuclease.
  
     0.593
Apre_0580
PFAM: acyltransferase 3; KEGG: bsu:BSU27140 hypothetical protein.
  
    0.582
Apre_0226
Putative membrane protein.
  
     0.579
Apre_1259
PFAM: peptidoglycan hydrolase; SH3 type-5 domain protein.
  
   
 0.560
Apre_1516
Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: rpi:Rpic_4263 transcriptional regulator, ArsR family.
 
   
 0.560
Apre_0307
TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: MATE efflux family protein.
     
 0.554
Apre_0408
KEGG: bca:BCE_3356 hypothetical protein.
  
   
 0.553
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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