STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0317TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: ccv:CCV52592_1797 CoA-substrate-specific enzyme activase domain-containing protein. (1424 aa)    
Predicted Functional Partners:
Apre_1577
PFAM: protein of unknown function DUF1113; KEGG: dde:Dde_0966 metal dependent phosphohydrolase.
 
     0.723
Apre_1060
PFAM: iron-containing alcohol dehydrogenase; KEGG: alcohol dehydrogensae.
   
  
 0.517
Apre_0684
PFAM: regulatory protein TetR; KEGG: dno:DNO_0445 TetR family transcriptional regulator.
 
   
 0.471
Apre_1321
PFAM: protein of unknown function DUF1312; KEGG: pca:Pcar_0036 hypothetical protein.
  
     0.457
Apre_0677
TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; PEP-utilising protein mobile region; Pyruvate kinase alpha/beta; KEGG: bha:BH3163 pyruvate kinase; Belongs to the pyruvate kinase family.
  
  
 0.448
purD
KEGG: dno:DNO_1110 phosphoribosylformylglycinamidine synthase; TIGRFAM: phosphoribosylformylglycinamidine synthase; phosphoribosylamine/glycine ligase; PFAM: AIR synthase related protein domain protein; phosphoribosylglycinamide synthetase; protein of unknown function DUF201; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Belongs to the GARS family.
 
   
 0.429
Apre_0547
PFAM: regulatory protein TetR; KEGG: bce:BC2410 TetR family transcriptional regulator.
     
 0.403
Apre_1074
PFAM: regulatory protein TetR; KEGG: ppu:PP_2824 TetR family transcriptional regulator.
     
 0.403
Apre_1096
PFAM: regulatory protein TetR; KEGG: sun:SUN_1158 TetR family transcriptional regulator.
     
 0.403
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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