STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0356TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: nma:NMA2095 putative integral membrane efflux protein. (346 aa)    
Predicted Functional Partners:
Apre_0355
PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: cju:C8J_1458 arsenate reductase.
  
  
 0.948
Apre_0354
KEGG: bca:BCE_A0156 arsenite-translocating ATPase ArsA; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase.
     
 0.840
Apre_0353
PFAM: Arsenical resistance operon trans-acting repressor ArsD; KEGG: rfr:Rfer_3665 arsenical resistance operon trans-acting repressor ArsD.
     
 0.756
Apre_0352
Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: dvl:Dvul_0525 regulatory protein, ArsR.
  
  
 0.694
Apre_1516
Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: rpi:Rpic_4263 transcriptional regulator, ArsR family.
  
  
 0.431
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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