Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Apre_0357Dihydropyrimidinase; KEGG: ppr:PBPRA1991 dihydropyrimidinase; TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase; Amidohydrolase 3. (457 aa)    
Predicted Functional Partners:
pyrB
KEGG: vfm:VFMJ11_0396 aspartate carbamoyltransferase; TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
 
 0.946
Apre_1430
Dihydropyrimidinase; KEGG: ppr:PBPRA1991 dihydropyrimidinase; TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase; Amidohydrolase 3.
  
  
 
0.901
Apre_0358
TIGRFAM: selenium-dependent molybdenum hydroxylase 1; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; ferredoxin; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: mag:amb1483 aldehyde oxidoreductase.
 
  
 0.876
Apre_1431
PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: sus:Acid_7658 NCS1 nucleoside transporter.
 
  
 0.814
Apre_0360
KEGG: dps:DP3064 hypothetical protein.
     
 0.802
pyrD
Dihydroorotate dehydrogenase family protein; Catalyzes the conversion of dihydroorotate to orotate.
 
 
 0.799
Apre_0359
KEGG: dps:DP3065 hypothetical protein.
       0.788
Apre_0362
PFAM: protein of unknown function DUF182; KEGG: sus:Acid_2901 hypothetical protein.
       0.788
Apre_0361
TIGRFAM: selenium-dependent molybdenum hydroxylase system protein, YqeB family; KEGG: eum:ECUMN_3218 conserved hypothetical protein; putative NAD(P)-binding Rossman fold.
       0.777
pyrF
TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: hne:HNE_0128 orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily.
  
  
 0.741
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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