STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0358TIGRFAM: selenium-dependent molybdenum hydroxylase 1; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; ferredoxin; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: mag:amb1483 aldehyde oxidoreductase. (877 aa)    
Predicted Functional Partners:
Apre_1423
PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: aha:AHA_2178 xanthine dehydrogenase subunit XdhB.
 
 0.996
Apre_0362
PFAM: protein of unknown function DUF182; KEGG: sus:Acid_2901 hypothetical protein.
 
  
 0.980
Apre_0360
KEGG: dps:DP3064 hypothetical protein.
 
  
 0.965
Apre_0359
KEGG: dps:DP3065 hypothetical protein.
 
  
 0.952
Apre_0361
TIGRFAM: selenium-dependent molybdenum hydroxylase system protein, YqeB family; KEGG: eum:ECUMN_3218 conserved hypothetical protein; putative NAD(P)-binding Rossman fold.
 
  
 0.947
Apre_1424
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: ecc:c3444 xanthine dehydrogenase subunit XdhA.
 
 
0.907
Apre_1422
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: aha:AHA_2179 xanthine dehydrogenase subunit XdhC.
 
 
0.901
Apre_1428
TIGRFAM: selenate reductase YgfK; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ecf:ECH74115_4168 putative selenate reductase.
 
  
 0.878
Apre_0357
Dihydropyrimidinase; KEGG: ppr:PBPRA1991 dihydropyrimidinase; TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase; Amidohydrolase 3.
 
  
 0.876
Apre_1432
TIGRFAM: M20/DapE family protein YgeY; PFAM: peptidase dimerisation domain protein; peptidase M20; KEGG: ecr:ECIAI1_2992 putative peptidase.
 
  
 0.849
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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