STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0394PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: pca:Pcar_2212 CBS domain-containing protein. (414 aa)    
Predicted Functional Partners:
Apre_0395
Inorganic diphosphatase; KEGG: pca:Pcar_1659 putative manganese-dependent inorganic pyrophosphatase; PFAM: DHHA2 domain protein; CBS domain containing protein; DRTGG domain protein; SMART: CBS domain containing protein.
       0.791
Apre_0396
PFAM: NUDIX hydrolase; KEGG: ATNUDT3; ATNUDT3 (Arabidopsis thaliana Nudix hydrolase homolog 3); hydrolase.
       0.590
Apre_0393
PFAM: Xanthine/uracil/vitamin C permease; KEGG: vsp:VS_2421 permease family protein.
  
    0.546
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.481
Apre_0397
PFAM: sodium:dicarboxylate symporter; KEGG: pmy:Pmen_0129 sodium:dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
  
    0.458
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
  
  
 0.434
Apre_0084
Hypothetical protein.
   
    0.418
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
 
     0.400
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.