STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0407PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcb:BCB4264_A3341 ABC transporter, ATP- binding protein. (240 aa)    
Predicted Functional Partners:
Apre_0743
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aba:Acid345_2827 ABC transporter, ATPase subunit.
   
0.907
Apre_0408
KEGG: bca:BCE_3356 hypothetical protein.
 
    0.846
Apre_0044
PFAM: ABC transporter related; SMC domain protein; SMART: AAA ATPase; KEGG: dps:DP3102 ABC transporter, ATP-binding protein.
 
     
0.631
Apre_1307
PFAM: ABC-2 type transporter; KEGG: cff:CFF8240_0262 ABC-type multidrug transport system permease component.
 
  
 0.563
Apre_1308
Hypothetical protein; KEGG: bcb:BCB4264_A1805 ABC transporter, permease protein.
 
  
 0.560
Apre_0409
TIGRFAM: oligoendopeptidase, M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: bca:BCE_1452 oligoendopeptidase F, putative.
  
    0.498
Apre_0672
Conserved hypothetical protein; Displays ATPase and GTPase activities.
   
    0.448
Apre_0406
Hypothetical protein.
       0.437
Apre_1091
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcb:BCB4264_A4956 efflux ABC transporter, ATP- binding protein.
   
0.429
Apre_0215
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcz:BCZK1718 multidrug ABC transporter, ATP- binding protein.
  
 
0.418
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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