STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0454PFAM: glycoside hydrolase family 4; KEGG: eta:ETA_14010 6-phospho-alpha-glucosidase. (442 aa)    
Predicted Functional Partners:
Apre_0453
TIGRFAM: PTS system, alpha-glucoside-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: bsu:BSU08200 phosphotransferase system (PTS) maltose-specific enzyme IICB component.
 
 
 0.993
Apre_0473
TIGRFAM: PTS system, trehalose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: pin:Ping_0522 trehalose(maltose)-specific PTS system components IIBC.
 
 
 0.964
Apre_0218
TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain; KEGG: bcy:Bcer98_0784 PTS system, beta-glucoside- specific IIABC subunit.
    
 0.924
Apre_0474
KEGG: bcu:BCAH820_0687 alpha,alpha-phosphotrehalase; TIGRFAM: alpha,alpha-phosphotrehalase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
     
 0.905
Apre_0456
Transcriptional regulator, RpiR family; PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: bsu:BSU08190 hypothetical protein.
 
  
 0.844
Apre_0455
Putative transcriptional regulator, RpiR family; KEGG: bsu:BSU08190 hypothetical protein.
 
  
 0.812
Apre_1585
PFAM: phosphotransferase system lactose/cellobiose- specific IIB subunit; KEGG: vfm:VFMJ11_0618 BglE.
 
  
 0.684
Apre_1587
PTS modulated transcriptional regulator, MtlR family; PFAM: PRD domain protein; Helix-turn-helix type 11 domain protein; M trans-acting positive regulator; KEGG: bsu:BSU38600 transcriptional regulator.
 
   
 0.595
Apre_1586
PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: bcz:BCZK4907 PTS system, cellobiose-specific IIA component (phosphotransferase enzyme II, A component).
 
  
 0.585
Apre_1583
PTS system, lactose/cellobiose family IIC subunit; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
  
 0.579
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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