STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0473TIGRFAM: PTS system, trehalose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: pin:Ping_0522 trehalose(maltose)-specific PTS system components IIBC. (481 aa)    
Predicted Functional Partners:
Apre_0218
TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain; KEGG: bcy:Bcer98_0784 PTS system, beta-glucoside- specific IIABC subunit.
 0.999
Apre_0474
KEGG: bcu:BCAH820_0687 alpha,alpha-phosphotrehalase; TIGRFAM: alpha,alpha-phosphotrehalase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
 
 
 0.990
Apre_0454
PFAM: glycoside hydrolase family 4; KEGG: eta:ETA_14010 6-phospho-alpha-glucosidase.
 
 
 0.964
Apre_0882
Phosphotransferase system, phosphocarrier protein HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: dno:DNO_0119 PTS phosphocarrier protein HPr.
  
 
 0.938
Apre_1641
Phosphotransferase system, phosphocarrier protein HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: mmw:Mmwyl1_2420 phosphotransferase system, phosphocarrier protein HPr.
  
 
 0.938
Apre_0152
PFAM: ROK family protein; KEGG: bha:BH0786 transcriptional regulator.
  
 
 0.934
Apre_0154
PFAM: ROK family protein; KEGG: bsu:BSU05860 hypothetical protein.
  
 
 0.934
Apre_0894
PFAM: ROK family protein; KEGG: bha:BH1425 glucose kinase.
  
 
 0.934
Apre_0148
PFAM: Hyaluronidase; KEGG: xcv:XCV4043 putative secreted protein.
  
  
 0.899
Apre_0383
TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose- specific IIB subunit; phosphotransferase system EIIC; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: bcy:Bcer98_2394 PTS system, fructose subfamily, IIC subunit.
 
  
 0.893
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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