Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Apre_0477TIGRFAM: sortase B cell surface sorting signal; KEGG: hypothetical protein similar to mature parasite-infected erythrocyte surface antigen or PfEMP2. (409 aa)    
Predicted Functional Partners:
Apre_0499
PFAM: YodA domain protein; KEGG: baa:BXA0197 zinc-binding lipoprotein AdcA domain protein, (pXO1-130).
   
  
 0.476
Apre_0476
Putative virion core protein; KEGG: smt:Smal_2106 hypothetical protein.
       0.442
Apre_0475
Hypothetical protein.
       0.435
Apre_0478
PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase; KEGG: pla:Plav_1100 ABC transporter related.
       0.424
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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