STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0479Hypothetical protein; KEGG: bcr:BCAH187_A4140 oligo-1,6-glucosidase. (340 aa)    
Predicted Functional Partners:
Apre_0473
TIGRFAM: PTS system, trehalose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: pin:Ping_0522 trehalose(maltose)-specific PTS system components IIBC.
 
  
 0.757
Apre_0480
PFAM: sodium:dicarboxylate symporter; KEGG: swp:swp_1386 sodium:dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
 
     0.631
Apre_0453
TIGRFAM: PTS system, alpha-glucoside-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: bsu:BSU08200 phosphotransferase system (PTS) maltose-specific enzyme IICB component.
 
  
 0.595
Apre_0478
PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase; KEGG: pla:Plav_1100 ABC transporter related.
       0.552
Apre_0083
TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: vsa:VSAL_I0831 PTS permease for N- acetylglucosamine and glucose.
  
  
 0.470
Apre_1540
PFAM: phosphotransferase system EIIC; KEGG: bcy:Bcer98_0671 PTS system, sucrose-specific IIBC component.
  
  
 0.470
Apre_0481
Hypothetical protein.
  
  
 0.405
glgA
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
  
  
 0.401
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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