node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Apre_0521 | Apre_0522 | Apre_0521 | Apre_0522 | PFAM: SMC domain protein; KEGG: bcb:BCB4264_A2326 putative exonuclease. | ATP-dependent nuclease subunit B-like protein; ATP-dependent DNA helicase. | 0.893 |
Apre_0521 | Apre_0523 | Apre_0521 | Apre_0523 | PFAM: SMC domain protein; KEGG: bcb:BCB4264_A2326 putative exonuclease. | UvrD/REP helicase; ATP-dependent DNA helicase. | 0.885 |
Apre_0521 | Apre_0776 | Apre_0521 | Apre_0776 | PFAM: SMC domain protein; KEGG: bcb:BCB4264_A2326 putative exonuclease. | PFAM: metallophosphoesterase; KEGG: bcr:BCAH187_A1178 DNA repair exonuclease family protein. | 0.989 |
Apre_0521 | Apre_0874 | Apre_0521 | Apre_0874 | PFAM: SMC domain protein; KEGG: bcb:BCB4264_A2326 putative exonuclease. | FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: hypothetical protein. | 0.789 |
Apre_0521 | Apre_0995 | Apre_0521 | Apre_0995 | PFAM: SMC domain protein; KEGG: bcb:BCB4264_A2326 putative exonuclease. | PFAM: DEAD_2 domain protein; SMART: helicase c2; Helicase-like, DEXD box c2 type; KEGG: bph:Bphy_5309 DEAD_2 domain-containing protein. | 0.807 |
Apre_0521 | Apre_1413 | Apre_0521 | Apre_1413 | PFAM: SMC domain protein; KEGG: bcb:BCB4264_A2326 putative exonuclease. | KEGG: bce:BC2815 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP- dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase domain protein; HRDC domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; HRDC domain protein. | 0.956 |
Apre_0521 | polA | Apre_0521 | Apre_1330 | PFAM: SMC domain protein; KEGG: bcb:BCB4264_A2326 putative exonuclease. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.935 |
Apre_0521 | recA | Apre_0521 | Apre_0618 | PFAM: SMC domain protein; KEGG: bcb:BCB4264_A2326 putative exonuclease. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.872 |
Apre_0521 | sbcD | Apre_0521 | Apre_0520 | PFAM: SMC domain protein; KEGG: bcb:BCB4264_A2326 putative exonuclease. | Nuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.999 |
Apre_0521 | topA | Apre_0521 | Apre_1289 | PFAM: SMC domain protein; KEGG: bcb:BCB4264_A2326 putative exonuclease. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.912 |
Apre_0522 | Apre_0521 | Apre_0522 | Apre_0521 | ATP-dependent nuclease subunit B-like protein; ATP-dependent DNA helicase. | PFAM: SMC domain protein; KEGG: bcb:BCB4264_A2326 putative exonuclease. | 0.893 |
Apre_0522 | Apre_0523 | Apre_0522 | Apre_0523 | ATP-dependent nuclease subunit B-like protein; ATP-dependent DNA helicase. | UvrD/REP helicase; ATP-dependent DNA helicase. | 0.998 |
Apre_0522 | sbcD | Apre_0522 | Apre_0520 | ATP-dependent nuclease subunit B-like protein; ATP-dependent DNA helicase. | Nuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.903 |
Apre_0523 | Apre_0521 | Apre_0523 | Apre_0521 | UvrD/REP helicase; ATP-dependent DNA helicase. | PFAM: SMC domain protein; KEGG: bcb:BCB4264_A2326 putative exonuclease. | 0.885 |
Apre_0523 | Apre_0522 | Apre_0523 | Apre_0522 | UvrD/REP helicase; ATP-dependent DNA helicase. | ATP-dependent nuclease subunit B-like protein; ATP-dependent DNA helicase. | 0.998 |
Apre_0523 | polA | Apre_0523 | Apre_1330 | UvrD/REP helicase; ATP-dependent DNA helicase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.530 |
Apre_0523 | recA | Apre_0523 | Apre_0618 | UvrD/REP helicase; ATP-dependent DNA helicase. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.509 |
Apre_0523 | sbcD | Apre_0523 | Apre_0520 | UvrD/REP helicase; ATP-dependent DNA helicase. | Nuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.900 |
Apre_0523 | topA | Apre_0523 | Apre_1289 | UvrD/REP helicase; ATP-dependent DNA helicase. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.435 |
Apre_0776 | Apre_0521 | Apre_0776 | Apre_0521 | PFAM: metallophosphoesterase; KEGG: bcr:BCAH187_A1178 DNA repair exonuclease family protein. | PFAM: SMC domain protein; KEGG: bcb:BCB4264_A2326 putative exonuclease. | 0.989 |