Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Apre_0542Protein-tyrosine-phosphatase; PFAM: PHP domain protein; KEGG: bsu:BSU36240 hypothetical protein. (258 aa)    
Predicted Functional Partners:
Apre_0540
PFAM: lipopolysaccharide biosynthesis protein; KEGG: bce:BC5278 chain length regulator (capsular polysaccharide biosynthesis).
 
 
 0.985
Apre_0541
TIGRFAM: capsular exopolysaccharide family; KEGG: bsu:BSU36250 hypothetical protein.
 
  
 0.974
Apre_0248
ATPase involved in chromosome partitioning-like protein; KEGG: rce:RC1_4006 succinoglycan biosynthesis transport protein ExoP.
 
  
 0.882
Apre_0165
PFAM: lipopolysaccharide biosynthesis protein; KEGG: bca:BCE_5399 chain length determinant protein.
 
 
 0.869
Apre_0543
PFAM: SH3 type 3 domain protein; KEGG: MAL13P1.310.
       0.781
Apre_0247
PFAM: lipopolysaccharide biosynthesis protein; KEGG: GJ16854 gene product from transcript GJ16854- RA.
  
 
 0.603
nnrE
Carbohydrate kinase, YjeF related protein; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.
 
     0.530
Apre_0532
KEGG: sat:SYN_00642 hypothetical protein.
       0.465
Apre_0533
Phosphoesterase RecJ domain protein; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.
       0.465
rplI
Ribosomal protein L9; Binds to the 23S rRNA.
       0.465
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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