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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0549Putative membrane protein; KEGG: bcr:BCAH187_A1238 phage infection protein. (767 aa)    
Predicted Functional Partners:
Apre_0548
PFAM: MMPL domain protein; KEGG: bha:BH0720 hypothetical protein.
   
 0.972
Apre_0547
PFAM: regulatory protein TetR; KEGG: bce:BC2410 TetR family transcriptional regulator.
 
  
 0.955
Apre_1579
PFAM: Cna B domain protein; G5 domain protein; KEGG: erythrocyte binding protein.
  
   
 0.661
Apre_0546
PFAM: Catalase domain protein; KEGG: ppd:Ppro_1932 catalase.
       0.500
Apre_0744
PFAM: protein of unknown function DUF214; KEGG: bcy:Bcer98_2177 hypothetical protein.
  
    0.444
Apre_0383
TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose- specific IIB subunit; phosphotransferase system EIIC; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: bcy:Bcer98_2394 PTS system, fructose subfamily, IIC subunit.
   
 
 0.436
Apre_1119
PFAM: G5 domain protein; KEGG: hypothetical protein.
  
     0.413
Apre_0774
PFAM: protein of unknown function DUF214; KEGG: lpc:LPC_0234 hypothetical protein.
 
 
 0.402
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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