STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0559PFAM: peptidase C1A papain; Ig domain protein group 2 domain protein; Rhodanese domain protein; SMART: peptidase C1A papain; Rhodanese domain protein; KEGG: sfu:Sfum_0222 peptidase C1A, papain. (2353 aa)    
Predicted Functional Partners:
Apre_0090
PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: har:HEAR0182 putative thioredoxin.
   
 0.860
Apre_0441
Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 
 0.784
Apre_1100
PFAM: Citrate synthase; KEGG: bca:BCE_4725 methylcitrate synthase.
    
 
 0.720
Apre_1579
PFAM: Cna B domain protein; G5 domain protein; KEGG: erythrocyte binding protein.
 
     0.563
Apre_0558
KEGG: hypothetical protein.
       0.538
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 0.530
Apre_1119
PFAM: G5 domain protein; KEGG: hypothetical protein.
  
     0.472
Apre_0557
KEGG: viral A-type inclusion protein.
       0.445
Apre_1453
TIGRFAM: LPXTG-motif cell wall anchor domain protein; KEGG: myosin heavy chain; K10352 myosin heavy chain.
 
     0.434
Apre_1582
Esterase/lipase-like protein; KEGG: bch:Bcen2424_0165 alpha/beta hydrolase domain-containing protein.
   
 0.432
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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