STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0560TIGRFAM: copper transport repressor, CopY/TcrY family; PFAM: Penicillinase repressor; KEGG: hne:HNE_2905 BlaI/MecI/CopY family transcriptional regulator. (149 aa)    
Predicted Functional Partners:
Apre_0561
TIGRFAM: copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: tcx:Tcr_0943 copper-translocating P-type ATPase.
 
  
 0.815
Apre_0987
TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: abu:Abu_0480 heavy-metal transporting P-type ATPase.
  
  
 0.789
Apre_1409
PFAM: Heavy metal transport/detoxification protein; KEGG: bcy:Bcer98_0512 heavy metal translocating P- type ATPase.
  
  
 0.683
Apre_1651
KEGG: bcr:BCAH187_A5379 hypothetical protein.
  
  
 0.491
Apre_1653
Hypothetical protein.
  
  
 0.491
Apre_0699
TIGRFAM: cadmium resistance transporter, CadD family; PFAM: cadmium resistance transporter; KEGG: ngk:NGK_1696 CadB.
  
     0.400
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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