STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0576PFAM: Malate/L-lactate dehydrogenase; KEGG: cko:CKO_05033 2,3-diketo-L-gulonate reductase; Belongs to the LDH2/MDH2 oxidoreductase family. (337 aa)    
Predicted Functional Partners:
Apre_0574
PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: atc:AGR_L_3530 hypothetical protein.
 
     0.819
Apre_0573
PFAM: Citrate transporter; KEGG: bbr:BB2987 hypothetical protein.
  
    0.791
Apre_0575
Hypothetical protein.
       0.779
Apre_0577
KEGG: bha:BH3136 hypothetical protein.
       0.741
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
  
    0.502
Apre_1614
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: bsu:BSU12330 hypothetical protein.
 
  
 0.412
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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