STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0602KEGG: bar:GBAA0623 hypothetical protein. (558 aa)    
Predicted Functional Partners:
Apre_0603
PFAM: ATPase associated with various cellular activities AAA_5; ATPase associated with various cellular activities AAA_3; SMART: AAA ATPase; KEGG: bsu:BSU19390 hypothetical protein.
 
  
 0.965
Apre_1368
PFAM: ATPase associated with various cellular activities AAA_5; ATPase associated with various cellular activities AAA_3; KEGG: bar:GBAA0624 NorQ protein, putative.
 
  
 0.856
Apre_0604
Hypothetical protein.
       0.773
Apre_0605
PFAM: carbon starvation protein CstA; KEGG: bar:GBAA1822 carbon starvation protein A, putative.
 
     0.678
Apre_0601
Hypothetical protein.
       0.623
Apre_0032
Hypothetical protein; KEGG: xca:xccb100_3123 membrane-anchored nucleotide- binding enzyme.
  
     0.515
Apre_0013
PFAM: peptidoglycan hydrolase; KEGG: hypothetical protein.
  
     0.508
Apre_0408
KEGG: bca:BCE_3356 hypothetical protein.
  
     0.482
Apre_0196
KEGG: rlt:Rleg2_1581 hypothetical protein.
  
     0.480
Apre_0455
Putative transcriptional regulator, RpiR family; KEGG: bsu:BSU08190 hypothetical protein.
  
     0.439
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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