Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Apre_0605PFAM: carbon starvation protein CstA; KEGG: bar:GBAA1822 carbon starvation protein A, putative. (484 aa)    
Predicted Functional Partners:
Apre_0603
PFAM: ATPase associated with various cellular activities AAA_5; ATPase associated with various cellular activities AAA_3; SMART: AAA ATPase; KEGG: bsu:BSU19390 hypothetical protein.
 
    0.685
Apre_0602
KEGG: bar:GBAA0623 hypothetical protein.
 
     0.677
Apre_0604
Hypothetical protein.
       0.615
Apre_1619
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bsu:BSU35950 ribose ABC transporter (permease); Belongs to the binding-protein-dependent transport system permease family.
   
    0.560
rimP
Protein of unknown function DUF150; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
     
 0.525
nusA
NusA antitermination factor; Participates in both transcription termination and antitermination.
 
     0.524
Apre_0601
Hypothetical protein.
       0.505
Apre_1620
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bsu:BSU35940 ribose ABC transporter ATP- binding protein.
  
  
 0.476
Apre_1618
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bsu:BSU35960 ribose ABC transporter (ribose- binding protein).
   
  
 0.471
Apre_1283
Hypothetical protein.
  
    0.463
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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