STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0642PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcz:BCZK2403 ABC transporter, ATP-binding protein. (297 aa)    
Predicted Functional Partners:
Apre_0640
Conserved hypothetical protein; KEGG: bcz:BCZK0910 ABC transporter permease.
 
  
 0.952
Apre_0644
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: bcz:BCZK0907 sensor histidine kinase.
 
    0.885
Apre_0641
Hypothetical protein; KEGG: bcz:BCZK0909 ABC transporter permease.
  
  
 0.811
Apre_0643
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bha:BH3426 two-component response regulator.
 
   
 0.753
ecfA-2
ABC transporter related; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
   
0.753
Apre_0743
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aba:Acid345_2827 ABC transporter, ATPase subunit.
  
0.616
Apre_0744
PFAM: protein of unknown function DUF214; KEGG: bcy:Bcer98_2177 hypothetical protein.
 
  
 0.511
Apre_0499
PFAM: YodA domain protein; KEGG: baa:BXA0197 zinc-binding lipoprotein AdcA domain protein, (pXO1-130).
  
     0.498
Apre_0742
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bcb:BCB4264_A4782 sensor histidine kinase.
  
   
 0.452
Apre_1123
KEGG: nis:NIS_0123 hypothetical protein.
  
     0.438
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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