Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Apre_0683KEGG: hso:HS_0428 hypothetical protein. (113 aa)    
Predicted Functional Partners:
Apre_0684
PFAM: regulatory protein TetR; KEGG: dno:DNO_0445 TetR family transcriptional regulator.
 
   
 0.682
Apre_0693
PFAM: Resolvase domain; Recombinase; KEGG: bca:BCE_0419 DNA recombinase, putative.
 
  
 0.668
Apre_0706
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cha:CHAB381_0626 AraC family transcriptional regulator.
 
     0.590
Apre_0690
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: abu:Abu_0339 ABC transporter, ATP- binding/permease protein.
 
     0.571
Apre_0691
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: abu:Abu_0338 ABC transporter, ATP- binding/permease protein.
 
     0.560
Apre_0707
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cha:CHAB381_0627 ABC transporter, ATP- binding/permease protein.
  
     0.495
Apre_1677
PFAM: NADPH-dependent FMN reductase; KEGG: rme:Rmet_2021 NADPH-dependent FMN reductase.
  
 
 0.492
Apre_0708
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cha:CHAB381_0628 ABC transporter, ATP-binding protein.
  
     0.486
Apre_0527
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_2515 putative alkanesulfonate ABC transporter, permease protein.
  
  
 0.483
Apre_0528
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bca:BCE_2961 sulfonate ABC transporter, ATP- binding protein, putative.
  
  
 0.469
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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