STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0684PFAM: regulatory protein TetR; KEGG: dno:DNO_0445 TetR family transcriptional regulator. (197 aa)    
Predicted Functional Partners:
Apre_0688
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: spe:Spro_3154 ABC transporter-related protein.
       0.713
Apre_0685
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1797 nickel ABC transporter (permease).
     
 0.711
Apre_0686
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH2076 oligopeptide ABC transporter (permease).
       0.709
Apre_0687
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bra:BRADO0891 peptide ABC transporter ATP- binding protein.
       0.709
Apre_0689
PFAM: extracellular solute-binding protein family 5; KEGG: bha:BH0567 nickel transport system (nickel- binding protein).
       0.709
Apre_0683
KEGG: hso:HS_0428 hypothetical protein.
 
   
 0.688
Apre_0691
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: abu:Abu_0338 ABC transporter, ATP- binding/permease protein.
 
   
 0.682
Apre_0690
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: abu:Abu_0339 ABC transporter, ATP- binding/permease protein.
 
   
 0.680
Apre_0317
TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: ccv:CCV52592_1797 CoA-substrate-specific enzyme activase domain-containing protein.
 
   
 0.471
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
  
    0.455
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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