STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0687PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bra:BRADO0891 peptide ABC transporter ATP- binding protein. (260 aa)    
Predicted Functional Partners:
Apre_0688
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: spe:Spro_3154 ABC transporter-related protein.
  
0.992
Apre_0686
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH2076 oligopeptide ABC transporter (permease).
  
 0.957
Apre_0685
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1797 nickel ABC transporter (permease).
 
 
 0.941
Apre_0689
PFAM: extracellular solute-binding protein family 5; KEGG: bha:BH0567 nickel transport system (nickel- binding protein).
 
  
 0.887
Apre_0389
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ban:BA4731 oligopeptide ABC transporter, oligopeptide-binding protein.
  
 0.881
ecfA-2
ABC transporter related; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
    
0.830
Apre_0019
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: rec:RHECIAT_PC0000316 probable oligopeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
    
0.777
Apre_0287
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vpa:VP1995 ABC transporter, ATP-binding protein.
 
    
0.750
Apre_0466
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BSU12940 dipeptide ABC transporter (permease).
  
 0.741
Apre_0773
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbt:BBta_3436 putative ABC transporter, ATP- binding protein.
 
    
0.718
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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