STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0701PFAM: periplasmic solute binding protein; KEGG: bsu:BSU30770 manganese ABC transporter membrane protein; Belongs to the bacterial solute-binding protein 9 family. (313 aa)    
Predicted Functional Partners:
Apre_0702
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bsu:BSU30760 manganese ABC transporter ATP- binding protein.
 
 
 0.998
Apre_0703
PFAM: ABC-3 protein; transport system permease protein; KEGG: bsu:BSU30750 manganese ABC transporter membrane protein.
 
 0.997
Apre_0704
PFAM: ABC-3 protein; KEGG: bsu:BSU30740 manganese ABC transporter.
 
 0.997
Apre_0705
Iron (metal) dependent repressor, DtxR family; PFAM: iron dependent repressor; SMART: iron dependent repressor; KEGG: tcx:Tcr_0904 iron dependent repressor.
 
  
 0.874
Apre_0463
PFAM: ABC-3 protein; transport system permease protein; KEGG: bsu:BSU02870 hypothetical protein.
  
 0.685
Apre_0518
PFAM: ABC-3 protein; KEGG: tdn:Suden_2063 hypothetical protein.
  
 0.662
Apre_0501
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bat:BAS4183 cation ABC transporter, ATP- binding protein, putative.
 
  
 0.661
Apre_0502
PFAM: ABC-3 protein; transport system permease protein; KEGG: bcb:BCB4264_A4398 putative cation ABC transporter, permease protein.
  
 0.647
Apre_0516
PFAM: periplasmic solute binding protein; KEGG: bha:BH2760 hypothetical protein.
  
   
 0.640
Apre_0517
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bce:BC4279 high-affinity zinc uptake system ATP-binding protein ZnuC.
 
  
 0.605
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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