Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Apre_0712KEGG: scl:sce0203 hypothetical protein. (208 aa)    
Predicted Functional Partners:
Apre_0711
PFAM: Methyltransferase type 11; methyltransferase small; UbiE/COQ5 methyltransferase; Methyltransferase type 12; KEGG: bcz:pE33L466_0386 methyltransferase.
 
     0.888
Apre_0713
Hydrolase or acyltransferase (alpha/beta hydrolase superfamily)-like protein; KEGG: atc:AGR_C_3731 hypothetical protein.
 
     0.800
Apre_0714
KEGG: bcb:BCB4264_A2969 hypothetical protein.
 
     0.778
Apre_0744
PFAM: protein of unknown function DUF214; KEGG: bcy:Bcer98_2177 hypothetical protein.
  
     0.754
Apre_0742
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bcb:BCB4264_A4782 sensor histidine kinase.
  
     0.711
Apre_1411
PFAM: sugar-binding domain protein; Rib/alpha/Esp surface antigen repeat protein; KEGG: Hypothetical protein CBG09238.
  
     0.670
Apre_0707
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cha:CHAB381_0627 ABC transporter, ATP- binding/permease protein.
 
     0.581
Apre_0640
Conserved hypothetical protein; KEGG: bcz:BCZK0910 ABC transporter permease.
  
     0.576
Apre_1520
Signal transduction histidine kinase-like protein; KEGG: bcz:BCZK2894 sensor histidine kinase.
  
     0.567
Apre_0708
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cha:CHAB381_0628 ABC transporter, ATP-binding protein.
 
     0.555
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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