STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0734HIRAN; PFAM: HIRAN; KEGG: rce:RC1_1924 hypothetical protein. (133 aa)    
Predicted Functional Partners:
Apre_0733
KEGG: viral A-type inclusion protein.
 
 
 
 0.957
Apre_0735
Hypothetical protein.
       0.773
Apre_1453
TIGRFAM: LPXTG-motif cell wall anchor domain protein; KEGG: myosin heavy chain; K10352 myosin heavy chain.
  
     0.701
Apre_1454
PFAM: Cna B domain protein; KEGG: AGAP002737-PA.
  
     0.611
Apre_0732
KEGG: rhoptry protein.
       0.556
Apre_0744
PFAM: protein of unknown function DUF214; KEGG: bcy:Bcer98_2177 hypothetical protein.
 
     0.556
Apre_1485
TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: bca:BCE_5330 sortase family protein.
  
     0.556
Apre_1486
TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: bca:BCE_1804 sortase family protein.
  
     0.548
mnmG
Glucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
   
   0.518
Apre_0008
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: bca:BCE_1085 serine-protein kinase RsbW.
  
     0.498
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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