STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0793KEGG: hypothetical protein. (332 aa)    
Predicted Functional Partners:
Apre_0791
Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.
       0.782
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
       0.782
Apre_0794
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
       0.752
dnaX
DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
       0.747
Apre_0528
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bca:BCE_2961 sulfonate ABC transporter, ATP- binding protein, putative.
  
  
 0.731
Apre_0527
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_2515 putative alkanesulfonate ABC transporter, permease protein.
  
  
 0.725
Apre_0683
KEGG: hso:HS_0428 hypothetical protein.
  
  
 0.512
Apre_0324
Hypothetical protein; KEGG: AGAP002737-PA.
  
     0.454
Apre_1677
PFAM: NADPH-dependent FMN reductase; KEGG: rme:Rmet_2021 NADPH-dependent FMN reductase.
  
  
 0.453
Apre_0167
Hypothetical protein.
  
     0.423
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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