STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0794Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family. (464 aa)    
Predicted Functional Partners:
Apre_1540
PFAM: phosphotransferase system EIIC; KEGG: bcy:Bcer98_0671 PTS system, sucrose-specific IIBC component.
 
 
 0.974
Apre_0072
PFAM: glycoside hydrolase clan GH-D; KEGG: bha:BH2223 alpha-galactosidase.
 
  
 0.932
Apre_0237
PFAM: glycoside hydrolase clan GH-D; KEGG: bha:BH2223 alpha-galactosidase.
 
  
 0.930
Apre_1584
PFAM: glycoside hydrolase family 1; KEGG: ent:Ent638_1307 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.927
Apre_0154
PFAM: ROK family protein; KEGG: bsu:BSU05860 hypothetical protein.
  
 
 0.920
Apre_0241
KEGG: dol:Dole_0651 sucrose phosphorylase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; Belongs to the glycosyl hydrolase 13 family. Sucrose phosphorylase subfamily.
  
 
 0.917
Apre_0153
Beta-glucosidase; PFAM: glycoside hydrolase family 1; KEGG: bsu:BSU05840 hypothetical protein; Belongs to the glycosyl hydrolase 1 family.
   
 
 0.913
Apre_1591
PFAM: glycoside hydrolase family 3 domain protein; KEGG: mmw:Mmwyl1_3059 xylan 1,4-beta-xylosidase.
  
 
 0.904
Apre_0473
TIGRFAM: PTS system, trehalose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: pin:Ping_0522 trehalose(maltose)-specific PTS system components IIBC.
 
  
 0.892
Apre_0793
KEGG: hypothetical protein.
       0.752
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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