STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0814Hypothetical protein. (77 aa)    
Predicted Functional Partners:
Apre_0815
Hypothetical protein.
       0.773
Apre_0816
Hypothetical protein.
       0.762
Apre_0817
Hypothetical protein.
       0.762
Apre_0812
Hypothetical protein.
       0.664
Apre_0813
PFAM: endodeoxyribonuclease RusA.
       0.664
Apre_0803
Hypothetical protein.
       0.626
Apre_0804
PFAM: Gp157 family protein; KEGG: bcy:Bcer98_2962 siphovirus GP157 family protein.
       0.626
Apre_0805
PFAM: ERF family protein; KEGG: esa:ESA_03098 hypothetical protein.
       0.626
Apre_0806
Hypothetical protein.
       0.626
Apre_0807
Hypothetical protein.
       0.626
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.