STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0826Hypothetical protein; KEGG: nis:NIS_0449 phage-related DNA-binding protein. (124 aa)    
Predicted Functional Partners:
Apre_0825
Hypothetical protein.
       0.773
Apre_0846
KEGG: bpt:Bpet0987 hypothetical protein.
 
     0.766
Apre_0113
Hypothetical protein; KEGG: mgm:Mmc1_1169 poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit.
  
     0.750
Apre_0824
Hypothetical protein.
       0.746
Apre_0835
TIGRFAM: phage portal protein, SPP1 family; PFAM: portal protein SPP1; KEGG: bcy:Bcer98_2946 SPP1 family phage portal protein.
 
     0.739
Apre_0827
Hypothetical protein.
       0.732
Apre_0852
KEGG: hiq:CGSHiGG_04755 hypothetical protein.
 
     0.722
Apre_0823
Fe-S-cluster redox enzyme-like protein; KEGG: wsu:WS0062 hypothetical protein.
       0.707
Apre_1411
PFAM: sugar-binding domain protein; Rib/alpha/Esp surface antigen repeat protein; KEGG: Hypothetical protein CBG09238.
  
     0.699
Apre_0819
Hypothetical protein.
       0.646
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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