STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0832Hypothetical protein. (261 aa)    
Predicted Functional Partners:
Apre_0830
PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; KEGG: dvl:Dvul_0872 nuclease.
 
    0.933
Apre_0592
KEGG: bca:BCE_0390 hypothetical protein.
 
     0.776
Apre_0831
PFAM: Radical SAM domain protein; KEGG: cbg:CbuG_0679 radical SAM superfamily protein.
       0.775
Apre_0833
KEGG: bha:BH3534 hypothetical protein.
       0.768
Apre_0834
TIGRFAM: phage terminase, large subunit, PBSX family; PFAM: protein of unknown function DUF264; KEGG: bcy:Bcer98_2947 PBSX family phage terminase large subunit.
       0.768
Apre_0835
TIGRFAM: phage portal protein, SPP1 family; PFAM: portal protein SPP1; KEGG: bcy:Bcer98_2946 SPP1 family phage portal protein.
       0.767
Apre_0836
PFAM: putative head morphogenesis protein SPP1 gp7; KEGG: mno:Mnod_3544 putative head morphogenesis protein SPP1 gp7.
       0.767
Apre_0837
Hypothetical protein; KEGG: zgc:63572.
       0.767
Apre_0717
KEGG: bca:BCE_0397 phage terminase, large subunit, putative.
 
     0.753
ribH
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
  
 
 0.744
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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