STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0840PFAM: major capsid protein HK97; KEGG: cjr:CJE1458 HK97 family major capsid protein. (313 aa)    
Predicted Functional Partners:
Apre_0839
KEGG: bcy:Bcer98_2944 hypothetical protein.
 
 
   0.966
Apre_0835
TIGRFAM: phage portal protein, SPP1 family; PFAM: portal protein SPP1; KEGG: bcy:Bcer98_2946 SPP1 family phage portal protein.
 
 
   0.872
Apre_0841
Hypothetical protein.
       0.757
Apre_0859
KEGG: gme:Gmet_0933 hypothetical protein.
   
   0.742
Apre_0843
KEGG: plu:plu2894 hypothetical protein.
       0.728
Apre_0845
Hypothetical protein.
       0.727
Apre_0847
KEGG: bpt:Bpet0988 hypothetical protein.
       0.727
Apre_0844
Hypothetical protein.
       0.726
Apre_0846
KEGG: bpt:Bpet0987 hypothetical protein.
       0.724
Apre_0842
Hypothetical protein.
       0.707
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.