STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0879KEGG: hypothetical protein. (204 aa)    
Predicted Functional Partners:
Apre_0880
KEGG: hypothetical protein.
       0.792
Apre_0897
KEGG: hypothetical protein.
 
     0.727
Apre_0884
KEGG: ban:BA2233 hypothetical protein.
 
     0.693
Apre_0881
Transcriptional regulator, LacI family; KEGG: bha:BH3241 transcriptional regulator involved in carbon catabolite control; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI.
  
    0.643
atpE
H+transporting two-sector ATPase E subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
     0.585
Apre_1471
Putative signal transduction histidine kinase; KEGG: ppd:Ppro_2661 putative anti-sigma regulatory factor, serine/threonine protein kinase.
  
     0.568
Apre_1487
PFAM: Cna B domain protein; KEGG: bca:BCE_0961 cell wall anchor domain-containing protein.
  
    0.568
Apre_0187
PFAM: peptidase S41; KEGG: similar to Interphotoreceptor retinoid- binding protein precursor (IRBP) (Interstitial retinol-binding protein).
  
     0.536
Apre_0455
Putative transcriptional regulator, RpiR family; KEGG: bsu:BSU08190 hypothetical protein.
  
     0.518
Apre_0779
PFAM: adenylate cyclase.
  
     0.517
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.