STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0888Hypothetical protein; KEGG: hdu:HD1832 aminoacyl-histidine dipeptidase. (457 aa)    
Predicted Functional Partners:
Apre_0316
KEGG: bcz:BCZK2240 aminoacyl-histidine dipeptidase; TIGRFAM: aminoacyl-histidine dipeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein.
  
  
 
0.928
Apre_0135
Glutamate--cysteine ligase; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). Belongs to the glutamate--cysteine ligase type 2 family. EgtA subfamily.
     
  0.900
Apre_0897
KEGG: hypothetical protein.
 
     0.896
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
  
 
 0.872
Apre_0887
PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: gme:Gmet_3548 PpiC-type peptidyl-prolyl cis- trans isomerase.
 
   
 0.817
Apre_1624
PFAM: aminotransferase class I and II; KEGG: cco:CCC13826_0327 aminotransferase, class II.
    
  0.807
Apre_0955
TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: bcy:Bcer98_0063 cysteine synthase A.
  
 
 0.803
Apre_0886
SMART: RNA binding S1 domain protein; KEGG: mmw:Mmwyl1_2031 RNA-binding S1 domain-containing protein; Belongs to the CvfB family.
       0.785
Apre_0885
PFAM: protein of unknown function DUF161; KEGG: bsu:BSU35280 hypothetical protein.
       0.769
Apre_0891
KEGG: hypothetical protein.
       0.769
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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