| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Apre_0769 | Apre_0908 | Apre_0769 | Apre_0908 | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | PFAM: YajC family protein; KEGG: dds:Ddes_1930 preprotein translocase, YajC subunit. | 0.936 |
| Apre_0769 | Apre_1736 | Apre_0769 | Apre_1736 | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | PFAM: 60 kDa inner membrane insertion protein; KEGG: pat:Patl_4312 60 kDa inner membrane insertion protein. | 0.986 |
| Apre_0769 | ffh | Apre_0769 | Apre_1304 | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.967 |
| Apre_0769 | ftsY | Apre_0769 | Apre_0958 | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | 0.969 |
| Apre_0769 | secA | Apre_0769 | Apre_1249 | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | 0.992 |
| Apre_0769 | secE | Apre_0769 | Apre_1149 | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | 0.997 |
| Apre_0769 | secY | Apre_0769 | Apre_1554 | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.992 |
| Apre_0908 | Apre_0769 | Apre_0908 | Apre_0769 | PFAM: YajC family protein; KEGG: dds:Ddes_1930 preprotein translocase, YajC subunit. | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.936 |
| Apre_0908 | Apre_1736 | Apre_0908 | Apre_1736 | PFAM: YajC family protein; KEGG: dds:Ddes_1930 preprotein translocase, YajC subunit. | PFAM: 60 kDa inner membrane insertion protein; KEGG: pat:Patl_4312 60 kDa inner membrane insertion protein. | 0.927 |
| Apre_0908 | ffh | Apre_0908 | Apre_1304 | PFAM: YajC family protein; KEGG: dds:Ddes_1930 preprotein translocase, YajC subunit. | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.926 |
| Apre_0908 | ftsY | Apre_0908 | Apre_0958 | PFAM: YajC family protein; KEGG: dds:Ddes_1930 preprotein translocase, YajC subunit. | Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | 0.927 |
| Apre_0908 | queA | Apre_0908 | Apre_0906 | PFAM: YajC family protein; KEGG: dds:Ddes_1930 preprotein translocase, YajC subunit. | S-adenosylmethionine/tRNA-ribosyltransferase- isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.818 |
| Apre_0908 | ruvB | Apre_0908 | Apre_0905 | PFAM: YajC family protein; KEGG: dds:Ddes_1930 preprotein translocase, YajC subunit. | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.809 |
| Apre_0908 | secA | Apre_0908 | Apre_1249 | PFAM: YajC family protein; KEGG: dds:Ddes_1930 preprotein translocase, YajC subunit. | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | 0.924 |
| Apre_0908 | secE | Apre_0908 | Apre_1149 | PFAM: YajC family protein; KEGG: dds:Ddes_1930 preprotein translocase, YajC subunit. | Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | 0.950 |
| Apre_0908 | secY | Apre_0908 | Apre_1554 | PFAM: YajC family protein; KEGG: dds:Ddes_1930 preprotein translocase, YajC subunit. | Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.934 |
| Apre_0908 | tgt | Apre_0908 | Apre_0907 | PFAM: YajC family protein; KEGG: dds:Ddes_1930 preprotein translocase, YajC subunit. | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...] | 0.872 |
| Apre_1736 | Apre_0769 | Apre_1736 | Apre_0769 | PFAM: 60 kDa inner membrane insertion protein; KEGG: pat:Patl_4312 60 kDa inner membrane insertion protein. | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.986 |
| Apre_1736 | Apre_0908 | Apre_1736 | Apre_0908 | PFAM: 60 kDa inner membrane insertion protein; KEGG: pat:Patl_4312 60 kDa inner membrane insertion protein. | PFAM: YajC family protein; KEGG: dds:Ddes_1930 preprotein translocase, YajC subunit. | 0.927 |
| Apre_1736 | ffh | Apre_1736 | Apre_1304 | PFAM: 60 kDa inner membrane insertion protein; KEGG: pat:Patl_4312 60 kDa inner membrane insertion protein. | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.942 |