STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0989PFAM: protein of unknown function DUF322. (139 aa)    
Predicted Functional Partners:
Apre_0987
TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: abu:Abu_0480 heavy-metal transporting P-type ATPase.
       0.607
Apre_0988
PFAM: protein of unknown function DUF156; KEGG: abu:Abu_0479 hypothetical protein.
       0.605
Apre_0985
PFAM: domain of unknown function DUF1727; Mur ligase middle domain protein; KEGG: bcy:Bcer98_0233 UDP-N-acetylmuramoylalanyl-D- glutamyl-2,6-diaminopimelate--D-alanyl- D-alanyl ligase.
 
     0.560
Apre_0984
PFAM: CobB/CobQ domain protein glutamine amidotransferase; KEGG: pen:PSEEN1383 cobyric acid synthase.
 
     0.514
Apre_0580
PFAM: acyltransferase 3; KEGG: bsu:BSU27140 hypothetical protein.
  
     0.481
Apre_0306
PFAM: major facilitator superfamily MFS_1; KEGG: cjj:CJJ81176_1679 major facilitator superfamily protein.
  
     0.479
Apre_1581
PFAM: major facilitator superfamily MFS_1; KEGG: atc:AGR_C_4286 hypothetical protein.
  
     0.477
Apre_0986
PFAM: acylphosphatase; KEGG: shn:Shewana3_1875 (NiFe) hydrogenase maturation protein HypF.
       0.436
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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