Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Apre_0996PFAM: nitroreductase; KEGG: esa:ESA_02486 nitroreductase A; Belongs to the flavin oxidoreductase frp family. (250 aa)    
Predicted Functional Partners:
Apre_1307
PFAM: ABC-2 type transporter; KEGG: cff:CFF8240_0262 ABC-type multidrug transport system permease component.
  
  
 0.737
Apre_0364
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bph:Bphy_4478 glyoxalase/bleomycin resistance protein/dioxygenase.
  
  
 0.707
Apre_1308
Hypothetical protein; KEGG: bcb:BCB4264_A1805 ABC transporter, permease protein.
  
  
 0.650
Apre_1284
PFAM: CMP/dCMP deaminase zinc-binding; KEGG: vfi:VF_0650 tRNA-specific adenosine deaminase.
  
  
 0.641
Apre_0994
TIGRFAM: RNA methyltransferase, TrmA family; PFAM: (Uracil-5)-methyltransferase; KEGG: RNA methyltransferase; K00599; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
       0.560
Apre_0995
PFAM: DEAD_2 domain protein; SMART: helicase c2; Helicase-like, DEXD box c2 type; KEGG: bph:Bphy_5309 DEAD_2 domain-containing protein.
       0.560
Apre_0992
KEGG: cha:CHAB381_0333 hypothetical protein.
  
  
 0.522
Apre_0997
Hypothetical protein; KEGG: ecn:Ecaj_0677 NADH dehydrogenase (quinone).
       0.475
Apre_1659
PFAM: Abortive infection protein; KEGG: bcb:BCB4264_A2388 CAAX amino protease family.
  
    0.438
Apre_1730
PFAM: Abortive infection protein; KEGG: bcz:BCZK4727 CAAX amino terminal protease family protein.
  
    0.438
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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