STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_1069Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. (414 aa)    
Predicted Functional Partners:
Apre_1071
PFAM: Maf family protein; KEGG: bsu:BSU28050 Maf-like protein; Belongs to the Maf family.
   
   0.797
Apre_1070
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bcb:BCB4264_A5532 hydrolase, haloacid dehalogenase-like family.
       0.781
Apre_1072
PFAM: peptidase C26; glutamine amidotransferase class-I; KEGG: afr:AFE_2528 glutamine amidotransferase, class I.
       0.781
Apre_1133
PFAM: protein of unknown function DUF34; KEGG: dal:Dalk_3075 protein of unknown function DUF34.
  
    0.486
Apre_1068
Magnesium transporter; Acts as a magnesium transporter.
       0.471
Apre_1073
KEGG: bca:BCE_1979 hypothetical protein.
       0.436
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate.
  
  
 0.415
Apre_1045
PFAM: peptidase M24; creatinase; KEGG: xaa-pro aminopeptidase.
  
 
 0.400
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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