STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_1070TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bcb:BCB4264_A5532 hydrolase, haloacid dehalogenase-like family. (227 aa)    
Predicted Functional Partners:
Apre_0503
PFAM: Aldehyde Dehydrogenase; KEGG: bce:BC1285 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.904
Apre_1153
PFAM: Aldehyde Dehydrogenase; KEGG: pca:Pcar_1701 aldehyde dehydrogenase, NAD- linked; Belongs to the aldehyde dehydrogenase family.
  
 
 0.904
Apre_1244
PFAM: Aldehyde Dehydrogenase; KEGG: cco:CCC13826_1326 elongation factor P (EF-P).
  
 
 0.904
Apre_1072
PFAM: peptidase C26; glutamine amidotransferase class-I; KEGG: afr:AFE_2528 glutamine amidotransferase, class I.
       0.788
Apre_1071
PFAM: Maf family protein; KEGG: bsu:BSU28050 Maf-like protein; Belongs to the Maf family.
       0.787
Apre_1069
Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
  
    0.786
Apre_0294
TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: bcb:BCB4264_A1065 glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.582
Apre_1068
Magnesium transporter; Acts as a magnesium transporter.
       0.464
Apre_1067
PFAM: alpha/beta hydrolase fold; KEGG: bbt:BBta_2505 alpha/beta family hydrolase.
  
  
 0.461
Apre_0507
TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pca:Pcar_2216 NAD synthetase.
  
  
 0.446
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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