STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_1077PFAM: Miro domain protein; KEGG: dno:DNO_0576 hypothetical protein. (444 aa)    
Predicted Functional Partners:
Apre_1078
PFAM: protein of unknown function DUF6 transmembrane; KEGG: atc:AGR_L_3039 hypothetical protein.
       0.581
Apre_1076
KEGG: hypothetical protein.
       0.520
Apre_0408
KEGG: bca:BCE_3356 hypothetical protein.
 
     0.501
Apre_1075
Hypothetical protein; KEGG: bcr:BCAH187_A0963 putative ABC transporter, permease protein.
       0.490
Apre_0163
KEGG: conserved hypothetical protein; K10401 kinesin family member 18/19.
  
     0.477
Apre_0324
Hypothetical protein; KEGG: AGAP002737-PA.
  
     0.468
Apre_0013
PFAM: peptidoglycan hydrolase; KEGG: hypothetical protein.
  
     0.467
Apre_0524
PFAM: metallophosphoesterase.
  
     0.451
Apre_0884
KEGG: ban:BA2233 hypothetical protein.
  
     0.425
Apre_1079
PFAM: FAD dependent oxidoreductase; KEGG: pne:Pnec_1130 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
       0.420
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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