STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_1079PFAM: FAD dependent oxidoreductase; KEGG: pne:Pnec_1130 FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (512 aa)    
Predicted Functional Partners:
Apre_1080
Dihydroxyacetone kinase, DhaK subunit; KEGG: bha:BH3397 dihydroxyacetone kinase; TIGRFAM: dihydroxyacetone kinase, DhaK subunit; PFAM: Dak kinase.
       0.547
Apre_1081
TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: vpa:VP0365 dihydroxyacetone kinase ADP- binding subunit.
       0.547
Apre_1082
PFAM: PTS system fructose subfamily IIA component; KEGG: msu:MS1608 hypothetical protein.
       0.547
Apre_1078
PFAM: protein of unknown function DUF6 transmembrane; KEGG: atc:AGR_L_3039 hypothetical protein.
       0.542
Apre_1077
PFAM: Miro domain protein; KEGG: dno:DNO_0576 hypothetical protein.
       0.420
Apre_1083
PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: bha:BH2384 ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
       0.408
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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