STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_1080Dihydroxyacetone kinase, DhaK subunit; KEGG: bha:BH3397 dihydroxyacetone kinase; TIGRFAM: dihydroxyacetone kinase, DhaK subunit; PFAM: Dak kinase. (325 aa)    
Predicted Functional Partners:
Apre_1081
TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: vpa:VP0365 dihydroxyacetone kinase ADP- binding subunit.
 
 0.999
Apre_1082
PFAM: PTS system fructose subfamily IIA component; KEGG: msu:MS1608 hypothetical protein.
 
 0.999
gpsA
PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: bsu:BSU22830 NAD(P)H-dependent glycerol-3- phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
   
 
 0.821
Apre_1490
PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: sat:SYN_02446 glycerol-3-phosphate dehydrogenase.
    
  0.807
Apre_0293
PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: NAD(FAD)-dependent dehydrogenase.
    
  0.802
Apre_1079
PFAM: FAD dependent oxidoreductase; KEGG: pne:Pnec_1130 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
       0.547
Apre_1083
PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: bha:BH2384 ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
       0.536
Apre_0294
TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: bcb:BCB4264_A1065 glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
  
 0.507
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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