Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Apre_1094PFAM: GCN5-related N-acetyltransferase; KEGG: vsa:VSAL_I0612 ribosomal-protein-alanine acetyltransferase. (143 aa)    
Predicted Functional Partners:
Apre_1095
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: radical SAM domain protein.
 
     0.771
Apre_1119
PFAM: G5 domain protein; KEGG: hypothetical protein.
 
     0.746
Apre_0744
PFAM: protein of unknown function DUF214; KEGG: bcy:Bcer98_2177 hypothetical protein.
  
     0.742
Apre_1096
PFAM: regulatory protein TetR; KEGG: sun:SUN_1158 TetR family transcriptional regulator.
       0.698
Apre_0742
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bcb:BCB4264_A4782 sensor histidine kinase.
  
     0.666
Apre_1579
PFAM: Cna B domain protein; G5 domain protein; KEGG: erythrocyte binding protein.
 
     0.583
Apre_0046
PFAM: major facilitator superfamily MFS_1; KEGG: bce:BC3225 macrolide-efflux protein.
 
     0.582
Apre_1179
KEGG: msu:MS1725 hypothetical protein.
 
  
 0.501
Apre_0045
Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bcr:BCAH187_A4756 transcriptional regulator, ArsR family.
 
     0.470
Apre_0734
HIRAN; PFAM: HIRAN; KEGG: rce:RC1_1924 hypothetical protein.
 
    0.452
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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